Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
1277595 bp
Thymine Count
1281358 bp
Guanine Count
1766352 bp
Cytosine Count
1758052 bp
Genome Length
6121542 bp
Protein-coding Genes
5958 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| serralysin | ALO35_05155 | Q1ID47 | Positive | 63737 - 65236 | 51575.9 |
| protease inhibitor inh | ALO35_02465 | Q87ZU3 | Positive | 65293 - 65676 | 13826.9 |
| type i secretion system atpase, prtd | ALO35_02466 | Q03024 | Positive | 65758 - 66477 | 25495.5 |
| type i secretion system atpase, prtd | ALO35_02467 | Not Available | Positive | 66437 - 67564 | 39439.5 |
| type i secretion membrane fusion protein, hlyd | ALO35_02468 | Q03025 | Positive | 67561 - 68859 | 45551.5 |
| abc transporter permease | ALO35_02469 | Q03027 | Positive | 68872 - 70221 | 50163.0 |
| n-methyltryptophan oxidase | ALO35_05156 | Not Available | Negative | 70232 - 71428 | 43384.5 |
| hypothetical protein | ALO35_102617 | Not Available | Negative | 71482 - 71607 | 4587.39 |
| uncharacterized protein | ALO35_05759 | Not Available | Positive | 72473 - 73405 | 30994.1 |
| regulatory protein, lysr:lysr, substrate-binding | ALO35_02471 | Not Available | Negative | 73658 - 74590 | 33863.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |
