Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
1277595 bp
Thymine Count
1281358 bp
Guanine Count
1766352 bp
Cytosine Count
1758052 bp
Genome Length
6121542 bp
Protein-coding Genes
5958 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | ALO35_02456 | B8EJS2 | Negative | 56675 - 57682 | 37448.9 |
| sulfurtransferase | ALO35_02457 | Q57QR9 | Negative | 57692 - 58027 | 11515.8 |
| dsrh family protein | ALO35_02458 | Not Available | Negative | 58024 - 58323 | 10912.2 |
| trna 5-methylaminomethyl-2-thiouridine synthase tusc | ALO35_02459 | Q9I0N2 | Negative | 58323 - 58685 | 13005.5 |
| trna 5-methylaminomethyl-2-thiouridine synthase tusd | ALO35_02460 | Q9I0N3 | Negative | 58687 - 59205 | 19033.7 |
| citrate-proton symporter | ALO35_02461 | Not Available | Positive | 59314 - 60615 | 46688.8 |
| putative abc transporter, periplasmic substrate-binding protein | ALO35_02462 | A0A0A1H8I4 | Positive | 60630 - 61409 | 27400.3 |
| transcriptional regulator, lysr family | ALO35_05154 | P52696 | Negative | 61395 - 62303 | 33309.7 |
| Trna-ser | Not Available | Not Available | Positive | 62447 - 62534 | Not Available |
| putative membrane protein | ALO35_02463 | Q03268 | Positive | 62621 - 63328 | 25596.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |
