Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
1277595 bp
Thymine Count
1281358 bp
Guanine Count
1766352 bp
Cytosine Count
1758052 bp
Genome Length
6121542 bp
Protein-coding Genes
5958 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative arginyl-trna--protein transferase | ALO35_02447 | Q48H68 | Negative | 46093 - 46800 | 27809.2 |
| leucyl/phenylalanyl-trna--protein transferase | ALO35_02448 | Q48H69 | Negative | 46849 - 47538 | 26052.8 |
| hypothetical protein | ALO35_101973 | Not Available | Negative | 47579 - 47854 | 10545.7 |
| cell division protein ftsk | ALO35_02449 | Q9Z3U1 | Positive | 48007 - 50412 | 87587.7 |
| outer-membrane lipoprotein carrier protein | ALO35_02450 | Q48H71 | Positive | 50489 - 51112 | 22882.6 |
| recombination factor protein rara | ALO35_02451 | P39918 | Positive | 51131 - 52453 | 48893.3 |
| putative fluoride ion transporter crcb | ALO35_02452 | Q48H73 | Positive | 52453 - 52827 | 13049.3 |
| serine--trna ligase | ALO35_02453 | Q48H74 | Positive | 52844 - 54124 | 47246.4 |
| siroheme synthase | ALO35_02454 | Q48H75 | Positive | 54125 - 55516 | 49913.6 |
| glutathione s-transferase domain-containing protein | ALO35_02455 | P42620 | Negative | 55568 - 56566 | 37791.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |
