Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
1277595 bp
Thymine Count
1281358 bp
Guanine Count
1766352 bp
Cytosine Count
1758052 bp
Genome Length
6121542 bp
Protein-coding Genes
5958 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, asnc family | ALO35_01644 | Not Available | Negative | 978244 - 978711 | 17627.5 |
| indolepyruvate ferredoxin oxidoreductase | ALO35_01645 | P80910 | Positive | 978896 - 982381 | 128317.0 |
| precorrin-4 c11-methyltransferase | ALO35_04950 | Q9HZP9 | Negative | 982466 - 983437 | 34915.9 |
| cobalamin biosynthesis cbig protein | ALO35_100614 | Not Available | Negative | 983248 - 983646 | 13675.6 |
| uncharacterized protein | ALO35_01647 | Not Available | Negative | 983686 - 984393 | 25170.4 |
| uncharacterized protein | ALO35_01648 | Not Available | Negative | 984404 - 984589 | 6297.38 |
| cobalamin biosynthesis protein cobw | ALO35_01649 | Q9HZQ2 | Positive | 985295 - 986359 | 38549.2 |
| cobaltochelatase subunit cobn | ALO35_04952 | Not Available | Positive | 986364 - 988520 | 76466.1 |
| cobaltochelatase subunit cobn | ALO35_01650 | Q9HZQ3 | Positive | 988492 - 988878 | 13361.8 |
| cobaltochelatase subunit cobn | ALO35_01651 | Not Available | Positive | 989166 - 990065 | 33531.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |
