Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
1277595 bp
Thymine Count
1281358 bp
Guanine Count
1766352 bp
Cytosine Count
1758052 bp
Genome Length
6121542 bp
Protein-coding Genes
5958 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna gyrase subunit b | ALO35_04749 | P13364 | Negative | 945239 - 947671 | 90604.0 |
| dna replication and repair protein recf | ALO35_00755 | Q500U5 | Negative | 947661 - 948764 | 41609.8 |
| dna polymerase iii subunit beta | ALO35_00756 | P0A120 | Negative | 948787 - 949890 | 40676.1 |
| chromosomal replication initiator protein dnaa | ALO35_04750 | Q48QK0 | Negative | 949929 - 951512 | 58674.2 |
| 50s ribosomal protein l34 | ALO35_00758 | Q48BE9 | Positive | 952057 - 952191 | 5124.46 |
| ribonuclease p protein component | ALO35_00759 | Q48BF0 | Positive | 952160 - 952609 | 17011.6 |
| membrane protein insertase yidc | ALO35_00760 | Q48BF2 | Positive | 952850 - 954541 | 61858.0 |
| trna modification gtpase mnme | ALO35_00761 | Q48BF3 | Positive | 954904 - 955998 | 39499.0 |
| trna uridine 5-carboxymethylaminomethyl modification enzyme mnmg | ALO35_00762 | Q48BF4 | Positive | 956584 - 958479 | 69346.0 |
| ribosomal rna small subunit methyltransferase g | ALO35_00763 | Q4ZL14 | Positive | 958476 - 959120 | 23887.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |
