Xenorhabdus japonica

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Morganellaceae

Genus

Xenorhabdus

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyMorganellaceae
GenusXenorhabdus
SpeciesXenorhabdus japonica
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Steinernema, Steinernema sp., Steinernema kushidai
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Xenorhabdus japonica strain DSM 16522 genome assembly, contig:

Gene Summary

Adenine Count

1016428 bp

Thymine Count

1023811 bp

Guanine Count

765943 bp

Cytosine Count

754672 bp

Genome Length

3561198 bp

Protein-coding Genes

3043 genes

Non-Coding Genes

253 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
crispr-associated protein, cse3 familySAMN05421579_10591Not AvailablePositive865698 - 86637226044.2
crispr-associated protein, cas1 familySAMN05421579_10592Not AvailablePositive866420 - 86729231922.0
crispr-associated protein, cas2 familySAMN05421579_10593Not AvailablePositive867295 - 86758811112.4
integrase core domain-containing proteinSAMN05421579_10594Not AvailableNegative868771 - 86949928386.3
6-phosphogluconolactonaseSAMN05421579_1061Not AvailableNegative869615 - 87060136700.5
hypothetical proteinSAMN05421579_1062Not AvailablePositive870751 - 87156630479.3
molybdate transport system atp-binding proteinSAMN05421579_1063Not AvailableNegative871710 - 87277439830.5
molybdate transport system permease proteinSAMN05421579_1064Not AvailableNegative872768 - 87346025015.6
molybdate transport system substrate-binding proteinSAMN05421579_1065Not AvailableNegative873478 - 87424828080.6
multidrug efflux pump-associated protein acrzSAMN05421579_1066Not AvailableNegative874493 - 8746335072.62

Displaying genes 971 – 980 of 3296 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.