Xenorhabdus japonica

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Morganellaceae

Genus

Xenorhabdus

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyMorganellaceae
GenusXenorhabdus
SpeciesXenorhabdus japonica
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Steinernema, Steinernema sp., Steinernema kushidai
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Xenorhabdus japonica strain DSM 16522 genome assembly, contig:

Gene Summary

Adenine Count

1016428 bp

Thymine Count

1023811 bp

Guanine Count

765943 bp

Cytosine Count

754672 bp

Genome Length

3561198 bp

Protein-coding Genes

3043 genes

Non-Coding Genes

253 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
5-deoxyglucuronate isomeraseSAMN05421579_10561Not AvailableNegative812702 - 81356532723.3
2-keto-myo-inositol dehydrataseSAMN05421579_10562Not AvailableNegative813587 - 81447732652.1
5-dehydro-2-deoxygluconokinaseSAMN05421579_10563Not AvailableNegative814532 - 81643670794.9
solute:na+ symporter, sss familySAMN05421579_10564Not AvailableNegative816494 - 81814960114.4
myo-inositol 2-dehydrogenaseSAMN05421579_10565Not AvailableNegative818380 - 81936636254.2
3d-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolaseSAMN05421579_10566Not AvailableNegative819543 - 82149271905.0
methylmalonate-semialdehyde dehydrogenaseSAMN05421579_10567Not AvailableNegative821500 - 82301154831.1
transcriptional regulator, rpir familySAMN05421579_10568Not AvailablePositive823296 - 82412930690.5
amino acid adenylation domain-containing proteinSAMN05421579_10569Not AvailableNegative824305 - 839988576166.0
short chain dehydrogenaseSAMN05421579_10570Not AvailableNegative841381 - 84196820782.8

Displaying genes 941 – 950 of 3296 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.