Xenorhabdus japonica

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Morganellaceae

Genus

Xenorhabdus

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyMorganellaceae
GenusXenorhabdus
SpeciesXenorhabdus japonica
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Steinernema, Steinernema sp., Steinernema kushidai
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Xenorhabdus japonica strain DSM 16522 genome assembly, contig:

Gene Summary

Adenine Count

1016428 bp

Thymine Count

1023811 bp

Guanine Count

765943 bp

Cytosine Count

754672 bp

Genome Length

3561198 bp

Protein-coding Genes

3043 genes

Non-Coding Genes

253 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5SAMN05421579_10511Not AvailableNegative744046 - 74543148928.9
enolaseSAMN05421579_10512Not AvailableNegative745785 - 74708645744.5
ctp synthaseSAMN05421579_10513Not AvailableNegative747187 - 74882460308.8
atp diphosphataseSAMN05421579_10514Not AvailableNegative749085 - 74987630355.2
gtp pyrophosphokinaseSAMN05421579_10515Not AvailableNegative749922 - 75215984643.7
23s rrna m(5)u-1939 methyltransferaseSAMN05421579_10516Not AvailableNegative752169 - 75350649827.3
two-component system, narl family, sensor histidine kinase baraSAMN05421579_10517Not AvailablePositive753560 - 75592088631.4
dgtpaseSAMN05421579_10518Not AvailableNegative755910 - 75743659474.3
adenosylhomocysteine nucleosidaseSAMN05421579_10519Not AvailablePositive757548 - 75824624798.1
vitamin b12 transport system substrate-binding proteinSAMN05421579_10520Not AvailablePositive758281 - 75916232887.4

Displaying genes 891 – 900 of 3296 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.