Xenorhabdus japonica

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Morganellaceae

Genus

Xenorhabdus

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyMorganellaceae
GenusXenorhabdus
SpeciesXenorhabdus japonica
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Steinernema, Steinernema sp., Steinernema kushidai
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Xenorhabdus japonica strain DSM 16522 genome assembly, contig:

Gene Summary

Adenine Count

1016428 bp

Thymine Count

1023811 bp

Guanine Count

765943 bp

Cytosine Count

754672 bp

Genome Length

3561198 bp

Protein-coding Genes

3043 genes

Non-Coding Genes

253 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
7-cyano-7-deazaguanine reductaseSAMN05421579_10494Not AvailableNegative687325 - 68817032432.3
fad/fmn-containing dehydrogenaseSAMN05421579_10495Not AvailableNegative688557 - 69024863525.8
secy interacting protein sydSAMN05421579_10496Not AvailablePositive690482 - 69103020603.5
uncharacterized conserved protein yqcc, duf446 familySAMN05421579_10497Not AvailablePositive691596 - 69195213610.3
trna pseudouridine synthase cSAMN05421579_10498Not AvailablePositive691954 - 69270628989.8
flavodoxinSAMN05421579_10499Not AvailablePositive692757 - 69320316336.2
protein of unknown functionSAMN05421579_104100Not AvailableNegative693307 - 69369315256.2
hypothetical proteinSAMN05421579_104101Not AvailablePositive693962 - 69459724578.5
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferaseSAMN05421579_104102Not AvailableNegative694727 - 69555130051.9
utp--glnb (protein pii) uridylyltransferase, glndSAMN05421579_104103Not AvailableNegative695589 - 698243102780.0

Displaying genes 841 – 850 of 3296 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.