Xenorhabdus japonica

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Morganellaceae

Genus

Xenorhabdus

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyMorganellaceae
GenusXenorhabdus
SpeciesXenorhabdus japonica
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Steinernema, Steinernema sp., Steinernema kushidai
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Xenorhabdus japonica strain DSM 16522 genome assembly, contig:

Gene Summary

Adenine Count

1016428 bp

Thymine Count

1023811 bp

Guanine Count

765943 bp

Cytosine Count

754672 bp

Genome Length

3561198 bp

Protein-coding Genes

3043 genes

Non-Coding Genes

253 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cysteine desulfuraseSAMN05421579_10483Not AvailableNegative674709 - 67601647809.3
lysr family transcriptional regulator, glycine cleavage system transcriptional activatorSAMN05421579_10485Not AvailablePositive676321 - 67724434568.4
uncharacterized membrane protein ygdd, tmem256/duf423 familySAMN05421579_10486Not AvailablePositive677301 - 67769614432.4
23s rrna (cytidine2498-2'-o)-methyltransferaseSAMN05421579_10487Not AvailablePositive677689 - 67878642459.6
serralysinSAMN05421579_10488Not AvailablePositive679458 - 68088852468.9
protease inhibitor inhSAMN05421579_10489Not AvailablePositive681123 - 68145511703.8
atp-binding cassette, subfamily c, exporter for protease/lipaseSAMN05421579_10490Not AvailablePositive681579 - 68335164690.4
membrane fusion protein, protease secretion systemSAMN05421579_10491Not AvailablePositive683403 - 68474349633.0
outer membrane protein, protease secretion systemSAMN05421579_10492Not AvailablePositive684749 - 68616453219.1
protein xniSAMN05421579_10493Not AvailableNegative686299 - 68705428069.6

Displaying genes 831 – 840 of 3296 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.