Xenorhabdus japonica

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Morganellaceae

Genus

Xenorhabdus

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyMorganellaceae
GenusXenorhabdus
SpeciesXenorhabdus japonica
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Steinernema, Steinernema sp., Steinernema kushidai
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Xenorhabdus japonica strain DSM 16522 genome assembly, contig:

Gene Summary

Adenine Count

1016428 bp

Thymine Count

1023811 bp

Guanine Count

765943 bp

Cytosine Count

754672 bp

Genome Length

3561198 bp

Protein-coding Genes

3043 genes

Non-Coding Genes

253 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinSAMN05421579_10463Not AvailablePositive650782 - 65117414661.8
prolipoprotein diacylglyceryl transferaseSAMN05421579_10464Not AvailablePositive651658 - 65254833428.4
thymidylate synthaseSAMN05421579_10465Not AvailablePositive652545 - 65333930206.0
hypothetical proteinSAMN05421579_10466Not AvailablePositive653875 - 65433016922.4
prepilin peptidase dependent protein aSAMN05421579_10467Not AvailablePositive654503 - 65500919086.9
prepilin peptidase dependent protein bSAMN05421579_10468Not AvailablePositive655006 - 65561723826.0
protein of unknown functionSAMN05421579_10469Not AvailablePositive655641 - 65609917480.7
prepilin peptidase dependent protein cSAMN05421579_10470Not AvailablePositive656096 - 65647914790.8
dna helicase/exodeoxyribonuclease v, gamma subunitSAMN05421579_10471Not AvailablePositive656472 - 659894131852.0
pitrilysin metallo peptidase. merops family m16aSAMN05421579_10472Not AvailablePositive659930 - 662815108346.0

Displaying genes 811 – 820 of 3296 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.