Xenorhabdus japonica

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Morganellaceae

Genus

Xenorhabdus

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyMorganellaceae
GenusXenorhabdus
SpeciesXenorhabdus japonica
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Steinernema, Steinernema sp., Steinernema kushidai
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Xenorhabdus japonica strain DSM 16522 genome assembly, contig:

Gene Summary

Adenine Count

1016428 bp

Thymine Count

1023811 bp

Guanine Count

765943 bp

Cytosine Count

754672 bp

Genome Length

3561198 bp

Protein-coding Genes

3043 genes

Non-Coding Genes

253 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cell division protein sufiSAMN05421579_10442Not AvailablePositive625609 - 62703052607.3
dihydrofolate reductaseSAMN05421579_10443Not AvailablePositive627366 - 62785118123.5
bis(5'nucleosyl)-tetraphosphatase, apahSAMN05421579_10444Not AvailableNegative627920 - 62874130908.4
apag proteinSAMN05421579_10445Not AvailableNegative628744 - 62912114267.1
dimethyladenosine transferaseSAMN05421579_10446Not AvailableNegative629158 - 62997330199.6
4-hydroxythreonine-4-phosphate dehydrogenaseSAMN05421579_10447Not AvailableNegative629966 - 63095835477.9
periplasmic chaperone for outer membrane proteins suraSAMN05421579_10448Not AvailableNegative630945 - 63224948395.1
lps-assembly proteinSAMN05421579_10449Not AvailableNegative632314 - 63467790472.0
dnaj like chaperone proteinSAMN05421579_10450Not AvailablePositive634860 - 63568431325.2
ribosomal large subunit pseudouridine synthase aSAMN05421579_10451Not AvailableNegative635691 - 63634424998.3

Displaying genes 791 – 800 of 3296 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.