Xenorhabdus japonica

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Morganellaceae

Genus

Xenorhabdus

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyMorganellaceae
GenusXenorhabdus
SpeciesXenorhabdus japonica
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Steinernema, Steinernema sp., Steinernema kushidai
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Xenorhabdus japonica strain DSM 16522 genome assembly, contig:

Gene Summary

Adenine Count

1016428 bp

Thymine Count

1023811 bp

Guanine Count

765943 bp

Cytosine Count

754672 bp

Genome Length

3561198 bp

Protein-coding Genes

3043 genes

Non-Coding Genes

253 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
udp-4-amino-4-deoxy-l-arabinose-oxoglutarate aminotransferaseSAMN05421579_103118Not AvailablePositive548672 - 54981742337.2
undecaprenyl-phosphate 4-deoxy-4-formamido-l-arabinose transferaseSAMN05421579_103119Not AvailablePositive549818 - 55079536641.9
udp-4-amino-4-deoxy-l-arabinose formyltransferase / udp-glucuronic acid dehydrogenase (udp-4-keto-hexauronic acid decarboxylating)SAMN05421579_103120Not AvailablePositive550795 - 55278074352.9
undecaprenyl phosphate-alpha-l-ara4fn deformylaseSAMN05421579_103121Not AvailablePositive552816 - 55370933537.5
4-amino-4-deoxy-l-arabinose transferaseSAMN05421579_103122Not AvailablePositive553756 - 55537862322.5
undecaprenyl phosphate-alpha-l-ara4n flippase subunit arneSAMN05421579_103123Not AvailablePositive555375 - 55572513090.0
undecaprenyl phosphate-alpha-l-ara4n flippase subunit arnfSAMN05421579_103124Not AvailablePositive555722 - 55612615416.4
probable lipoprotein nlpcSAMN05421579_103125Not AvailablePositive556226 - 55671118547.4
lipoate-protein ligase aSAMN05421579_103126Not AvailablePositive556785 - 55780138067.3
iron complex transport system atp-binding proteinSAMN05421579_103127Not AvailableNegative558106 - 55890029889.4

Displaying genes 721 – 730 of 3296 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.