Xenorhabdus japonica

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Morganellaceae

Genus

Xenorhabdus

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyMorganellaceae
GenusXenorhabdus
SpeciesXenorhabdus japonica
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Steinernema, Steinernema sp., Steinernema kushidai
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Xenorhabdus japonica strain DSM 16522 genome assembly, contig:

Gene Summary

Adenine Count

1016428 bp

Thymine Count

1023811 bp

Guanine Count

765943 bp

Cytosine Count

754672 bp

Genome Length

3561198 bp

Protein-coding Genes

3043 genes

Non-Coding Genes

253 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenaseSAMN05421579_10365Not AvailableNegative500279 - 50177554432.3
alcohol dehydrogenase, class ivSAMN05421579_10366Not AvailableNegative501798 - 50295841381.3
h+/gluconate symporterSAMN05421579_10367Not AvailableNegative502993 - 50437849157.5
transposaseSAMN05421579_10368Not AvailablePositive504702 - 50497710298.6
hypothetical proteinSAMN05421579_10369Not AvailableNegative505011 - 5052509153.09
two-component system, narl family, sensor histidine kinase uhpbSAMN05421579_10370Not AvailablePositive505397 - 50695359035.0
mfs transporter, opa family, sugar phosphate sensor protein uhpcSAMN05421579_10371Not AvailablePositive506963 - 50733714048.2
mfs transporter, opa family, sugar phosphate sensor protein uhpcSAMN05421579_10372Not AvailablePositive507467 - 50829430540.6
protein n-acetyltransferase, rimj/riml familySAMN05421579_10373Not AvailableNegative508341 - 50889221275.4
23s rrna m(1)g-745 methyltransferaseSAMN05421579_10374Not AvailablePositive509066 - 50988131128.1

Displaying genes 671 – 680 of 3296 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
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Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.