Xenorhabdus japonica

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Morganellaceae

Genus

Xenorhabdus

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyMorganellaceae
GenusXenorhabdus
SpeciesXenorhabdus japonica
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Steinernema, Steinernema sp., Steinernema kushidai
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Xenorhabdus japonica strain DSM 16522 genome assembly, contig:

Gene Summary

Adenine Count

1016428 bp

Thymine Count

1023811 bp

Guanine Count

765943 bp

Cytosine Count

754672 bp

Genome Length

3561198 bp

Protein-coding Genes

3043 genes

Non-Coding Genes

253 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
arsenate reductaseSAMN05421579_10335Not AvailableNegative464863 - 46521913549.7
putative zn-dependent protease, contains tpr repeatsSAMN05421579_10336Not AvailableNegative465231 - 46669454691.3
putative permeaseSAMN05421579_10337Not AvailablePositive466848 - 46790338998.5
peroxiredoxin q/bcpSAMN05421579_10338Not AvailableNegative468127 - 46859717710.1
protein of unknown functionSAMN05421579_10339Not AvailablePositive468997 - 46972527474.9
glycine cleavage system transcriptional repressorSAMN05421579_10340Not AvailableNegative469842 - 47042921755.2
dihydrodipicolinate synthaseSAMN05421579_10341Not AvailablePositive470681 - 47158031792.4
beta-barrel assembly machine subunit bamcSAMN05421579_10342Not AvailablePositive471598 - 47264438195.3
phosphoribosylaminoimidazole-succinocarboxamide synthaseSAMN05421579_10343Not AvailablePositive472736 - 47344927122.7
uncharacterized membrane protein, duf441 familySAMN05421579_10344Not AvailablePositive474312 - 47476415791.3

Displaying genes 641 – 650 of 3296 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.