Xenorhabdus japonica

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Morganellaceae

Genus

Xenorhabdus

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyMorganellaceae
GenusXenorhabdus
SpeciesXenorhabdus japonica
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Steinernema, Steinernema sp., Steinernema kushidai
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Xenorhabdus japonica strain DSM 16522 genome assembly, contig:

Gene Summary

Adenine Count

1016428 bp

Thymine Count

1023811 bp

Guanine Count

765943 bp

Cytosine Count

754672 bp

Genome Length

3561198 bp

Protein-coding Genes

3043 genes

Non-Coding Genes

253 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pilin (type 1 fimbria component protein)SAMN05421579_102156Not AvailablePositive398115 - 39867820888.1
hypothetical proteinSAMN05421579_102157Not AvailablePositive398744 - 39958330970.2
helix-turn-helixSAMN05421579_102158Not AvailablePositive399602 - 39987710250.6
chaperonin groelSAMN05421579_102159Not AvailableNegative400071 - 40171757542.4
chaperonin groesSAMN05421579_102160Not AvailableNegative401776 - 40206910364.6
upf0716 protein fxsaSAMN05421579_102161Not AvailableNegative402245 - 40280820621.1
aspartate ammonia-lyaseSAMN05421579_102162Not AvailablePositive403166 - 40459051912.0
anaerobic c4-dicarboxylate transporter dcuaSAMN05421579_102163Not AvailablePositive404732 - 40603345866.0
thiol:disulfide interchange protein dsbdSAMN05421579_102164Not AvailablePositive406163 - 40796267056.9
transcriptional regulator, tetr familySAMN05421579_102165Not AvailablePositive407981 - 40855322048.5

Displaying genes 581 – 590 of 3296 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.