Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Morganellaceae
Genus
Xenorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Morganellaceae |
| Genus | Xenorhabdus |
| Species | Xenorhabdus japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Steinernema, Steinernema sp., Steinernema kushidai |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1016428 bp
Thymine Count
1023811 bp
Guanine Count
765943 bp
Cytosine Count
754672 bp
Genome Length
3561198 bp
Protein-coding Genes
3043 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tatd dnase family protein | SAMN05421579_102146 | Not Available | Positive | 385983 - 386753 | 28772.5 |
| concentrative nucleoside transporter, cnt family | SAMN05421579_102147 | Not Available | Positive | 387094 - 388371 | 44340.4 |
| deoxyribose-phosphate aldolase | SAMN05421579_102148 | Not Available | Positive | 388840 - 389619 | 27709.0 |
| thymidine phosphorylase | SAMN05421579_102149 | Not Available | Positive | 389723 - 391093 | 49138.2 |
| phosphopentomutase | SAMN05421579_102150 | Not Available | Positive | 391171 - 392394 | 44742.9 |
| purine-nucleoside phosphorylase | SAMN05421579_102151 | Not Available | Positive | 392465 - 393181 | 25856.1 |
| pilin (type 1 fimbria component protein) | SAMN05421579_102152 | Not Available | Positive | 393399 - 393938 | 18637.6 |
| papc n-terminal domain-containing protein | SAMN05421579_102153 | Not Available | Positive | 394538 - 394909 | 13558.3 |
| outer membrane usher protein fimd/papc | SAMN05421579_102154 | Not Available | Positive | 394948 - 397146 | 81671.3 |
| p pilus assembly protein, chaperone papd | SAMN05421579_102155 | Not Available | Positive | 397280 - 398041 | 28136.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
