Xenorhabdus japonica

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Morganellaceae

Genus

Xenorhabdus

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyMorganellaceae
GenusXenorhabdus
SpeciesXenorhabdus japonica
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Steinernema, Steinernema sp., Steinernema kushidai
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Xenorhabdus japonica strain DSM 16522 genome assembly, contig:

Gene Summary

Adenine Count

1016428 bp

Thymine Count

1023811 bp

Guanine Count

765943 bp

Cytosine Count

754672 bp

Genome Length

3561198 bp

Protein-coding Genes

3043 genes

Non-Coding Genes

253 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
carbamoyl-phosphate synthase large subunitSAMN05421579_102126Not AvailablePositive365164 - 368394118523.0
type 1 fimbriae regulatory protein fimbSAMN05421579_102127Not AvailablePositive368589 - 36928126946.0
protein of unknown functionSAMN05421579_102128Not AvailablePositive369645 - 36998611862.2
l-lysine 2,3-aminomutaseSAMN05421579_102129Not AvailableNegative370157 - 37118838881.2
translation elongation factor p (ef-p)SAMN05421579_102130Not AvailablePositive371229 - 37179520638.6
quaternary ammonium compound-resistance protein sugeSAMN05421579_102131Not AvailablePositive371997 - 37231110727.7
transcriptional regulator, nlp familySAMN05421579_102132Not AvailableNegative372357 - 3725697929.45
dna-binding transcriptional regulator, xre-family hth domainSAMN05421579_102133Not AvailablePositive372783 - 3729536361.58
purine nucleosidaseSAMN05421579_102134Not AvailableNegative373263 - 37421334525.9
gamma-glutamylputrescine oxidaseSAMN05421579_102135Not AvailablePositive374636 - 37595548890.9

Displaying genes 551 – 560 of 3296 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.