Xenorhabdus japonica

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Morganellaceae

Genus

Xenorhabdus

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyMorganellaceae
GenusXenorhabdus
SpeciesXenorhabdus japonica
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Steinernema, Steinernema sp., Steinernema kushidai
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Xenorhabdus japonica strain DSM 16522 genome assembly, contig:

Gene Summary

Adenine Count

1016428 bp

Thymine Count

1023811 bp

Guanine Count

765943 bp

Cytosine Count

754672 bp

Genome Length

3561198 bp

Protein-coding Genes

3043 genes

Non-Coding Genes

253 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
16s rrna m(3)u-1498 methyltransferaseSAMN05421579_10256Not AvailableNegative280372 - 28110327118.0
type iv leader peptidase family proteinSAMN05421579_10257Not AvailablePositive281467 - 28191316652.0
metal-dependent hydrolase, beta-lactamase superfamily iiSAMN05421579_10258Not AvailableNegative282762 - 28364632292.9
transcriptional regulator, lysr familySAMN05421579_10259Not AvailablePositive283787 - 28470133909.4
dna-binding transcriptional regulator, lysr familySAMN05421579_10260Not AvailableNegative284684 - 28561335206.6
diaminopimelate decarboxylaseSAMN05421579_10261Not AvailablePositive285769 - 28704947431.1
acyl-coa dehydrogenaseSAMN05421579_10262Not AvailableNegative287125 - 28957289303.1
protein of unknown functionSAMN05421579_10263Not AvailablePositive290156 - 29056915580.9
protein of unknown functionSAMN05421579_10264Not AvailablePositive290526 - 29088213216.1
uncharacterized membrane proteinSAMN05421579_10265Not AvailablePositive290882 - 29189836913.6

Displaying genes 481 – 490 of 3296 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.