Xenorhabdus japonica

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Morganellaceae

Genus

Xenorhabdus

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyMorganellaceae
GenusXenorhabdus
SpeciesXenorhabdus japonica
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Steinernema, Steinernema sp., Steinernema kushidai
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Xenorhabdus japonica strain DSM 16522 genome assembly, contig:

Gene Summary

Adenine Count

1016428 bp

Thymine Count

1023811 bp

Guanine Count

765943 bp

Cytosine Count

754672 bp

Genome Length

3561198 bp

Protein-coding Genes

3043 genes

Non-Coding Genes

253 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
putative thioredoxinSAMN05421579_10226Not AvailableNegative250890 - 25176833024.3
hypothetical proteinSAMN05421579_10227Not AvailableNegative251844 - 25262028637.8
acyl-coa thioesterase-1SAMN05421579_10228Not AvailableNegative252684 - 25326521647.2
putative abc transport system atp-binding proteinSAMN05421579_10229Not AvailablePositive253287 - 25397325020.3
putative abc transport system permease proteinSAMN05421579_10230Not AvailablePositive253970 - 25640290891.1
pyrimidine oxygenaseSAMN05421579_10231Not AvailableNegative256478 - 25753339319.0
cyanate permeaseSAMN05421579_10232Not AvailableNegative257576 - 25888047866.4
nucleoside-specific outer membrane channel protein tsxSAMN05421579_10233Not AvailableNegative258908 - 25979834766.5
transcriptional regulator, tetr familySAMN05421579_10234Not AvailableNegative260722 - 26136024575.4
outer membrane pore protein fSAMN05421579_10235Not AvailablePositive261910 - 26306441873.9

Displaying genes 451 – 460 of 3296 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.