Xenorhabdus japonica

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Morganellaceae

Genus

Xenorhabdus

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyMorganellaceae
GenusXenorhabdus
SpeciesXenorhabdus japonica
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Steinernema, Steinernema sp., Steinernema kushidai
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Xenorhabdus japonica strain DSM 16522 genome assembly, contig:

Gene Summary

Adenine Count

1016428 bp

Thymine Count

1023811 bp

Guanine Count

765943 bp

Cytosine Count

754672 bp

Genome Length

3561198 bp

Protein-coding Genes

3043 genes

Non-Coding Genes

253 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinSAMN05421579_101178Not AvailableNegative187588 - 1877225143.31
amino acid abc transporter substrate-binding protein, paat familySAMN05421579_101179Not AvailableNegative187746 - 18851928564.1
predicted branched-chain amino acid permease (azaleucine resistance)SAMN05421579_101180Not AvailablePositive189063 - 18985729643.2
hypothetical proteinSAMN05421579_101181Not AvailablePositive189953 - 1901868587.9
atp-grasp domain-containing proteinSAMN05421579_101182Not AvailableNegative190329 - 19156447350.1
uncharacterized nad(p)/fad-binding protein ydhsSAMN05421579_101183Not AvailableNegative191586 - 19304055237.7
selenocysteine lyase/cysteine desulfuraseSAMN05421579_101184Not AvailableNegative193070 - 19429346443.8
cysteine synthase aSAMN05421579_101185Not AvailableNegative194539 - 19554937400.6
arginyl-trna synthetaseSAMN05421579_101186Not AvailableNegative196027 - 19776965569.7
o-methyltransferaseSAMN05421579_101187Not AvailablePositive198266 - 19888022586.1

Displaying genes 401 – 410 of 3296 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.