Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Morganellaceae
Genus
Xenorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Morganellaceae |
| Genus | Xenorhabdus |
| Species | Xenorhabdus japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Steinernema, Steinernema sp., Steinernema kushidai |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1016428 bp
Thymine Count
1023811 bp
Guanine Count
765943 bp
Cytosine Count
754672 bp
Genome Length
3561198 bp
Protein-coding Genes
3043 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alkylhydroperoxidase ahpd family core domain-containing protein | SAMN05421579_101158 | Not Available | Negative | 165100 - 165297 | 7414.85 |
| rnase z | SAMN05421579_101159 | Not Available | Negative | 165415 - 166332 | 33715.6 |
| trna(fmet)-specific endonuclease vapc | SAMN05421579_101160 | Not Available | Negative | 166811 - 167203 | 14725.9 |
| antitoxin vapb | SAMN05421579_101161 | Not Available | Negative | 167203 - 167466 | 10321.1 |
| lyse type translocator | SAMN05421579_101162 | Not Available | Positive | 167673 - 168023 | 13463.8 |
| d-cysteine desulfhydrase | SAMN05421579_101163 | Not Available | Negative | 168121 - 169116 | 35971.7 |
| transporter, nhac family | SAMN05421579_101164 | Not Available | Negative | 169139 - 170563 | 51523.7 |
| cystathionine gamma-lyase | SAMN05421579_101165 | Not Available | Negative | 170607 - 171752 | 42003.5 |
| 3-oxoacyl-[acyl-carrier-protein] synthase ii | SAMN05421579_101166 | Not Available | Positive | 173010 - 174245 | 44732.4 |
| maoc like domain-containing protein | SAMN05421579_101167 | Not Available | Positive | 174242 - 174952 | 27112.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
