Xenorhabdus japonica

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Morganellaceae

Genus

Xenorhabdus

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyMorganellaceae
GenusXenorhabdus
SpeciesXenorhabdus japonica
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Steinernema, Steinernema sp., Steinernema kushidai
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Xenorhabdus japonica strain DSM 16522 genome assembly, contig:

Gene Summary

Adenine Count

1016428 bp

Thymine Count

1023811 bp

Guanine Count

765943 bp

Cytosine Count

754672 bp

Genome Length

3561198 bp

Protein-coding Genes

3043 genes

Non-Coding Genes

253 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
adhesin/invasinSAMN05421579_101138Not AvailableNegative142763 - 145825113296.0
regulatory helix-turn-helix protein, lysr familySAMN05421579_101139Not AvailableNegative146988 - 14765024399.9
predicted arabinose efflux permease, mfs familySAMN05421579_101140Not AvailablePositive147775 - 14896841442.3
predicted lipid carrier protein yhbt, contains scp2 domainSAMN05421579_101141Not AvailablePositive149317 - 14969114180.3
putative acetyltransferaseSAMN05421579_101142Not AvailablePositive149685 - 15020319214.6
putative endonucleaseSAMN05421579_101143Not AvailableNegative150157 - 15054614737.2
protein of unknown functionSAMN05421579_101144Not AvailablePositive150839 - 1510908521.31
hypothetical proteinSAMN05421579_101145Not AvailablePositive151208 - 15163916467.1
ribonucleoside-triphosphate reductase class iii activase subunitSAMN05421579_101146Not AvailableNegative151686 - 15217118510.1
ribonucleoside-triphosphate reductase class iii catalytic subunitSAMN05421579_101147Not AvailableNegative152155 - 15409572879.7

Displaying genes 361 – 370 of 3296 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.