Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Morganellaceae
Genus
Xenorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Morganellaceae |
| Genus | Xenorhabdus |
| Species | Xenorhabdus japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Steinernema, Steinernema sp., Steinernema kushidai |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1016428 bp
Thymine Count
1023811 bp
Guanine Count
765943 bp
Cytosine Count
754672 bp
Genome Length
3561198 bp
Protein-coding Genes
3043 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosome-binding factor a | SAMN05421579_101127 | Not Available | Positive | 132135 - 132545 | 15356.5 |
| trna pseudouridine synthase b | SAMN05421579_101128 | Not Available | Positive | 132545 - 133489 | 35674.8 |
| ssu ribosomal protein s15p | SAMN05421579_101130 | Not Available | Positive | 133688 - 133957 | 10025.2 |
| polyribonucleotide nucleotidyltransferase | SAMN05421579_101132 | Not Available | Positive | 134218 - 136356 | 77536.1 |
| lipoprotein nlpi | SAMN05421579_101133 | Not Available | Positive | 136537 - 137421 | 33798.9 |
| atp-dependent rna helicase csda | SAMN05421579_101134 | Not Available | Positive | 137592 - 139535 | 72371.9 |
| 5s ribosomal rna . bacterial tsu | Not Available | Not Available | Positive | 137691 - 137778 | 18.01 |
| two component transcriptional regulator, lyttr family | SAMN05421579_101135 | Not Available | Negative | 140040 - 140759 | 27626.7 |
| two-component system, lytt family, sensor kinase | SAMN05421579_101136 | Not Available | Negative | 140762 - 142459 | 62676.9 |
| hypothetical protein | SAMN05421579_101137 | Not Available | Positive | 142486 - 142629 | 5499.67 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
