Xenorhabdus japonica

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Morganellaceae

Genus

Xenorhabdus

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyMorganellaceae
GenusXenorhabdus
SpeciesXenorhabdus japonica
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Steinernema, Steinernema sp., Steinernema kushidai
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Xenorhabdus japonica strain DSM 16522 genome assembly, contig:

Gene Summary

Adenine Count

1016428 bp

Thymine Count

1023811 bp

Guanine Count

765943 bp

Cytosine Count

754672 bp

Genome Length

3561198 bp

Protein-coding Genes

3043 genes

Non-Coding Genes

253 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
mu dna-binding domain-containing proteinSAMN05421579_101106Not AvailablePositive114191 - 11453813285.8
mu dna-binding domain-containing proteinSAMN05421579_101107Not AvailablePositive114614 - 11499414550.5
octaprenyl-diphosphate synthaseSAMN05421579_101108Not AvailableNegative115022 - 11599335475.4
lsu ribosomal protein l21pSAMN05421579_101109Not AvailablePositive116245 - 11655311468.0
lsu ribosomal protein l27pSAMN05421579_101110Not AvailablePositive116574 - 1168319183.06
gtp-binding proteinSAMN05421579_101111Not AvailablePositive116959 - 11812543689.8
d-ala-d-ala peptidase c. serine peptidase. merops family s13SAMN05421579_101112Not AvailableNegative118212 - 11966053170.3
transcription elongation factor greaSAMN05421579_101114Not AvailablePositive119933 - 12040917572.8
rna-binding proteinSAMN05421579_101115Not AvailableNegative120549 - 12084210838.5
23s rrna um-2552 2'-o-methyltransferaseSAMN05421579_101116Not AvailablePositive120977 - 12160623390.4

Displaying genes 331 – 340 of 3296 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Result columns

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.