Xenorhabdus japonica

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Morganellaceae

Genus

Xenorhabdus

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyMorganellaceae
GenusXenorhabdus
SpeciesXenorhabdus japonica
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Steinernema, Steinernema sp., Steinernema kushidai
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Xenorhabdus japonica strain DSM 16522 genome assembly, contig:

Gene Summary

Adenine Count

1016428 bp

Thymine Count

1023811 bp

Guanine Count

765943 bp

Cytosine Count

754672 bp

Genome Length

3561198 bp

Protein-coding Genes

3043 genes

Non-Coding Genes

253 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
peptide-methionine (s)-s-oxide reductaseSAMN05421579_10196Not AvailableNegative101640 - 10228724247.3
autotransporter secretion outer membrane protein tamaSAMN05421579_10197Not AvailablePositive102425 - 10416765723.5
autotransporter secretion inner membrane protein tambSAMN05421579_10198Not AvailablePositive104164 - 107961137352.0
uncharacterized conserved protein ytfp, gamma-glutamylcyclotransferase (ggct)/aig2-like familySAMN05421579_10199Not AvailablePositive107964 - 10831113590.2
inorganic pyrophosphataseSAMN05421579_101100Not AvailableNegative108414 - 10894419757.5
d-fructose 1,6-bisphosphataseSAMN05421579_101101Not AvailableNegative109052 - 11005636832.1
udp-n-acetylmuramate: l-alanyl-gamma-d-glutamyl-meso-diaminopimelate ligaseSAMN05421579_101102Not AvailablePositive110229 - 11159950128.4
transcriptional regulator, argr familySAMN05421579_101103Not AvailableNegative111717 - 11218717120.7
malate dehydrogenase (nad)SAMN05421579_101104Not AvailablePositive112693 - 11363132714.8
transcriptional regulator, nlp familySAMN05421579_101105Not AvailableNegative113737 - 11400310029.0

Displaying genes 321 – 330 of 3296 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.