Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Morganellaceae
Genus
Xenorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Morganellaceae |
| Genus | Xenorhabdus |
| Species | Xenorhabdus japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Steinernema, Steinernema sp., Steinernema kushidai |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1016428 bp
Thymine Count
1023811 bp
Guanine Count
765943 bp
Cytosine Count
754672 bp
Genome Length
3561198 bp
Protein-coding Genes
3043 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna mismatch repair protein mutl | SAMN05421579_10176 | Not Available | Positive | 81498 - 83498 | 73599.2 |
| trna dimethylallyltransferase | SAMN05421579_10177 | Not Available | Positive | 83491 - 84432 | 35171.5 |
| rna-binding protein hfq | SAMN05421579_10178 | Not Available | Positive | 84541 - 84843 | 10860.8 |
| gtp-binding protein hflx | SAMN05421579_10179 | Not Available | Positive | 84941 - 86221 | 48094.7 |
| protease ftsh subunit hflk | SAMN05421579_10180 | Not Available | Positive | 86542 - 87753 | 44113.9 |
| protease ftsh subunit hflc | SAMN05421579_10181 | Not Available | Positive | 87756 - 88760 | 37740.9 |
| adenylosuccinate synthetase | SAMN05421579_10182 | Not Available | Positive | 89016 - 90314 | 47237.7 |
| transcriptional regulator, badm/rrf2 family | SAMN05421579_10183 | Not Available | Positive | 90562 - 90981 | 15354.8 |
| rnase r | SAMN05421579_10184 | Not Available | Positive | 91026 - 93509 | 94621.5 |
| 23s rrna gm-2251 2'-o-methyltransferase | SAMN05421579_10185 | Not Available | Positive | 93628 - 94365 | 26741.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
