Xenorhabdus japonica

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Morganellaceae

Genus

Xenorhabdus

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyMorganellaceae
GenusXenorhabdus
SpeciesXenorhabdus japonica
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Steinernema, Steinernema sp., Steinernema kushidai
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Xenorhabdus japonica strain DSM 16522 genome assembly, contig:

Gene Summary

Adenine Count

1016428 bp

Thymine Count

1023811 bp

Guanine Count

765943 bp

Cytosine Count

754672 bp

Genome Length

3561198 bp

Protein-coding Genes

3043 genes

Non-Coding Genes

253 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
succinyl-coa synthetase (adp-forming) alpha subunitSAMN05421579_10627Not AvailableNegative890821 - 89169029759.3
succinyl-coa synthetase (adp-forming) beta subunitSAMN05421579_10628Not AvailableNegative891690 - 89285641217.8
2-oxoglutarate dehydrogenase e2 componentSAMN05421579_10629Not AvailableNegative893016 - 89422744261.4
2-oxoglutarate dehydrogenase e1 componentSAMN05421579_10630Not AvailableNegative894241 - 897048105348.0
hypothetical proteinSAMN05421579_10631Not AvailableNegative897177 - 8972723643.52
succinate dehydrogenase subunit bSAMN05421579_10632Not AvailableNegative897384 - 89810026876.6
succinate dehydrogenase subunit aSAMN05421579_10633Not AvailableNegative898138 - 89990464554.0
succinate dehydrogenase subunit dSAMN05421579_10634Not AvailableNegative899905 - 90025212812.2
succinate dehydrogenase subunit cSAMN05421579_10635Not AvailableNegative900246 - 90062313524.1
citrate synthaseSAMN05421579_10636Not AvailablePositive901257 - 90254048260.9

Displaying genes 1001 – 1010 of 3296 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.