Kingdom
Bacillati
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Pediococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Bacilli |
| Order | Lactobacillales |
| Family | Lactobacillaceae |
| Genus | Pediococcus |
| Species | Pediococcus damnosus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Coccus |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | beer; brewery; cider; wine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pediococcus damnosus strain DSM 20331 Scaffold201, whole genome
Gene Summary
Adenine Count
677734 bp
Thymine Count
676162 bp
Guanine Count
411835 bp
Cytosine Count
425990 bp
Genome Length
2191735 bp
Protein-coding Genes
2034 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| toxin-antitoxin system, antitoxin component, hicb family | IV84_GL000389 | Not Available | Positive | 2092872 - 2093306 | 16070.2 |
| hypothetical protein | IV84_GL000390 | Not Available | Negative | 2093363 - 2094052 | 23870.2 |
| lysozyme domain-containing protein | IV84_GL000391 | Not Available | Negative | 2094067 - 2095389 | 50255.1 |
| hypothetical protein | IV84_GL000392 | Not Available | Positive | 2095732 - 2095917 | 7378.08 |
| hypothetical protein | IV84_GL000393 | Not Available | Negative | 2096177 - 2096362 | 6834.76 |
| plasmid partition protein | IV84_GL000394 | Not Available | Positive | 2096508 - 2097293 | 30476.4 |
| hypothetical protein | IV84_GL000395 | Not Available | Positive | 2097348 - 2097551 | 7804.45 |
| replication protein repb | IV84_GL000396 | Not Available | Positive | 2099611 - 2100471 | 32546.0 |
| transposase | IV84_GL000397 | Not Available | Positive | 2101327 - 2101590 | 10069.1 |
| transposase | IV84_GL000398 | Not Available | Positive | 2101629 - 2102396 | 30400.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Fournier ??s gangrene | Causes | PMC12859440 |
| Fournier s gangrene | Causes | PMC12859440 |
