Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | H72 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
930933 bp
Thymine Count
929341 bp
Guanine Count
1727969 bp
Cytosine Count
1735915 bp
Genome Length
5324244 bp
Protein-coding Genes
4713 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-alanyl-d-alanine carboxypeptidase | A4V15_00125 | Not Available | Positive | 27203 - 28666 | 53049.6 |
| cation acetate symporter | A4V15_00130 | Not Available | Negative | 29186 - 30841 | 58547.8 |
| hypothetical protein | A4V15_00135 | Not Available | Negative | 30838 - 31149 | 11598.3 |
| Ncrna_class:rnase_p_rna | Not Available | Not Available | Positive | 31878 - 32233 | Not Available |
| efflux transporter periplasmic adaptor subunit | A4V15_00140 | Not Available | Negative | 31246 - 32148 | 33652.4 |
| transporter | A4V15_00145 | Not Available | Negative | 32177 - 32380 | 7274.24 |
| fusaric acid resistance protein | A4V15_00150 | Not Available | Negative | 32367 - 34370 | 72053.5 |
| trna dihydrouridine synthase dusc | A4V15_00155 | Not Available | Negative | 34524 - 35522 | 36060.8 |
| 4-hydroxybenzoyl-coa thioesterase | A4V15_00160 | Not Available | Negative | 35524 - 35964 | 16640.9 |
| Trna-arg | Not Available | Not Available | Positive | 36108 - 36184 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |
