Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | H72 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
930933 bp
Thymine Count
929341 bp
Guanine Count
1727969 bp
Cytosine Count
1735915 bp
Genome Length
5324244 bp
Protein-coding Genes
4713 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A4V15_00080 | Not Available | Positive | 17671 - 18063 | 14233.7 |
| hypothetical protein | A4V15_00085 | Not Available | Positive | 18060 - 18401 | 12763.9 |
| diguanylate phosphodiesterase | A4V15_00090 | Not Available | Positive | 18504 - 19682 | 43960.1 |
| deoxyguanosinetriphosphate triphosphohydrolase | A4V15_00095 | Not Available | Positive | 19777 - 21108 | 49775.5 |
| dna ligase-associated dexh box helicase | A4V15_00100 | Not Available | Positive | 21120 - 23741 | 96702.9 |
| Ncrna_class:srp_rna | Not Available | Not Available | Positive | 23391 - 23487 | Not Available |
| gntr family transcriptional regulator | A4V15_00105 | Not Available | Negative | 23695 - 24546 | 31610.2 |
| hypothetical protein | A4V15_00110 | Not Available | Negative | 24870 - 25106 | 8591.5 |
| cold-shock protein | A4V15_00115 | Not Available | Positive | 25888 - 26097 | 7619.99 |
| hypothetical protein | A4V15_00120 | Not Available | Positive | 26202 - 26858 | 23561.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |
