Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | H72 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
930933 bp
Thymine Count
929341 bp
Guanine Count
1727969 bp
Cytosine Count
1735915 bp
Genome Length
5324244 bp
Protein-coding Genes
4713 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| recombination-associated protein rdgc | A4V15_00030 | Not Available | Positive | 5496 - 6416 | 33984.9 |
| sodium transporter | A4V15_00035 | Not Available | Positive | 6529 - 7470 | 32923.7 |
| diguanylate cyclase | A4V15_00040 | Not Available | Negative | 7360 - 9876 | 91918.5 |
| gcn5 family acetyltransferase | A4V15_00045 | Not Available | Negative | 10052 - 10618 | 21346.6 |
| hybrid sensor histidine kinase/response regulator | A4V15_00050 | Not Available | Positive | 10777 - 14247 | 126521.0 |
| nad(p)-dependent oxidoreductase | A4V15_00055 | Not Available | Positive | 14813 - 15691 | 32389.1 |
| hypothetical protein | A4V15_00060 | Not Available | Positive | 15789 - 16070 | 10151.2 |
| hypothetical protein | A4V15_00065 | Not Available | Positive | 16090 - 16515 | 15366.7 |
| hypothetical protein | A4V15_00070 | Not Available | Negative | 16642 - 16929 | 10340.4 |
| hypothetical protein | A4V15_00075 | Not Available | Positive | 17260 - 17655 | 14536.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |
