Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | H72 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
930933 bp
Thymine Count
929341 bp
Guanine Count
1727969 bp
Cytosine Count
1735915 bp
Genome Length
5324244 bp
Protein-coding Genes
4713 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Hypothetical protein | A4V15_14135 | Not Available | Positive | 1088428 - 1088823 | 13400.8 |
| Putative major head subunit protein | A4V15_14140 | Not Available | Positive | 1088846 - 1089754 | 33177.1 |
| hypothetical protein | A4V15_14145 | Not Available | Positive | 1089755 - 1090441 | 23880.2 |
| Pf07030 family protein | A4V15_14150 | Not Available | Positive | 1090438 - 1090929 | 18015.3 |
| hypothetical protein | A4V15_14155 | Not Available | Positive | 1090929 - 1091498 | 21145.5 |
| hypothetical protein | A4V15_14160 | Not Available | Positive | 1091498 - 1091749 | 8849.56 |
| Tail sheath protein gpl | A4V15_14165 | Not Available | Positive | 1091746 - 1092840 | 38068.1 |
| Tail tube protein | A4V15_14170 | Not Available | Positive | 1092853 - 1093224 | 13661.2 |
| hypothetical protein | A4V15_14175 | Not Available | Positive | 1093229 - 1093612 | 13407.0 |
| hypothetical protein | A4V15_14180 | Not Available | Positive | 1093722 - 1094003 | 10227.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |
