Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | H72 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
930933 bp
Thymine Count
929341 bp
Guanine Count
1727969 bp
Cytosine Count
1735915 bp
Genome Length
5324244 bp
Protein-coding Genes
4713 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Hypothetical protein | A4V15_14085 | Not Available | Positive | 1079884 - 1080198 | 11979.4 |
| Gp1 | A4V15_14090 | Not Available | Positive | 1080200 - 1080712 | 18268.0 |
| Hypothetical protein | A4V15_14095 | Not Available | Positive | 1080709 - 1081278 | 20930.8 |
| Putative portal protein | A4V15_14100 | Not Available | Positive | 1081353 - 1082843 | 55566.9 |
| Hypothetical protein | A4V15_14105 | Not Available | Positive | 1082843 - 1084387 | 56511.2 |
| hypothetical protein | A4V15_14110 | Not Available | Negative | 1084384 - 1084653 | 9879.8 |
| Head morphogenesis protein | A4V15_14115 | Not Available | Positive | 1084677 - 1085960 | 47713.1 |
| Phage virion morphogenesis protein | A4V15_14120 | Not Available | Positive | 1086092 - 1086658 | 20454.3 |
| hypothetical protein | A4V15_14125 | Not Available | Positive | 1086809 - 1087309 | 18337.4 |
| I protein | A4V15_14130 | Not Available | Positive | 1087465 - 1088424 | 34201.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |
