Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | H72 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
930933 bp
Thymine Count
929341 bp
Guanine Count
1727969 bp
Cytosine Count
1735915 bp
Genome Length
5324244 bp
Protein-coding Genes
4713 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Hypothetical protein | A4V15_14025 | Not Available | Positive | 1074628 - 1074867 | 8447.16 |
| Hypothetical protein | A4V15_14035 | Not Available | Positive | 1074938 - 1075612 | 24352.5 |
| Hypothetical protein | A4V15_14045 | Not Available | Positive | 1075685 - 1075960 | 10074.3 |
| Putative mu-like gema | A4V15_14050 | Not Available | Positive | 1075957 - 1076361 | 15103.2 |
| Regulator of late transcription | A4V15_14055 | Not Available | Positive | 1076358 - 1076804 | 16776.9 |
| Putative holin protein | A4V15_14060 | Not Available | Positive | 1077763 - 1078050 | 10620.5 |
| Transglycosylase slt domain protein | A4V15_14065 | Not Available | Positive | 1078053 - 1078697 | 23519.2 |
| Dna-packaging protein | A4V15_14070 | Not Available | Positive | 1078694 - 1079350 | 22936.2 |
| Conserved hypothetical bacterial protein | A4V15_14075 | Not Available | Positive | 1079337 - 1079552 | 7919.31 |
| Gp25 | A4V15_14080 | Not Available | Positive | 1079552 - 1079887 | 12954.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |
