Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas synxantha |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizospheres |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare, Brassicaceae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas synxantha strain A342 PF_A342_contig_724, whole genome
Gene Summary
Adenine Count
1223985 bp
Thymine Count
1232160 bp
Guanine Count
1827966 bp
Cytosine Count
1829686 bp
Genome Length
6117397 bp
Protein-coding Genes
5237 genes
Non-Coding Genes
170 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| isoleucine--trna ligase | BFW89_03185 | Not Available | Positive | 726403 - 729234 | 105725.0 |
| signal peptidase ii | BFW89_03190 | Not Available | Positive | 729227 - 729739 | 18877.0 |
| peptidylprolyl isomerase | BFW89_03195 | Not Available | Positive | 729732 - 730184 | 16374.4 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | BFW89_03200 | Not Available | Positive | 730362 - 731309 | 34535.1 |
| general secretion pathway protein gsph | BFW89_03205 | Not Available | Negative | 731263 - 731844 | 20494.5 |
| type iv pilus modification protein pilv | BFW89_03210 | Not Available | Positive | 732051 - 732536 | 17411.7 |
| pilus assembly protein pilw | BFW89_03215 | Not Available | Positive | 732533 - 733240 | 24670.6 |
| pilus assembly protein pilx | BFW89_03220 | Not Available | Positive | 733246 - 733776 | 18681.8 |
| pilus assembly protein | BFW89_03225 | Not Available | Positive | 733788 - 734189 | 14139.1 |
| glycine oxidase thio | BFW89_03230 | Not Available | Positive | 734252 - 735361 | 39117.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
