Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas synxantha |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizospheres |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare, Brassicaceae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas synxantha strain A342 PF_A342_contig_724, whole genome
Gene Summary
Adenine Count
1223985 bp
Thymine Count
1232160 bp
Guanine Count
1827966 bp
Cytosine Count
1829686 bp
Genome Length
6117397 bp
Protein-coding Genes
5237 genes
Non-Coding Genes
170 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| escc/yscc/hrcc family type iii secretion system outer membrane ring protein | BFW89_02930 | Not Available | Negative | 679787 - 681913 | 79037.4 |
| type iii secretion protein | BFW89_02935 | Not Available | Negative | 681928 - 682320 | 14332.2 |
| type iii secretion protein | BFW89_02940 | Not Available | Negative | 682321 - 682536 | 8339.74 |
| type iii secretion protein | BFW89_02945 | Not Available | Negative | 682625 - 683218 | 22820.1 |
| type iii secretion protein | BFW89_02950 | Not Available | Negative | 683196 - 683801 | 23036.3 |
| escj/yscj/hrcj family type iii secretion inner membrane ring protein | BFW89_02955 | Not Available | Negative | 683791 - 684591 | 29021.3 |
| type iii secretion protein | BFW89_02960 | Not Available | Negative | 684594 - 684965 | 13512.9 |
| type iii secretion protein | BFW89_02965 | Not Available | Negative | 685084 - 685248 | 5524.52 |
| aaa family atpase | BFW89_02970 | Not Available | Negative | 685522 - 686445 | 34421.8 |
| redox-regulated atpase ychf | BFW89_02975 | Not Available | Negative | 686766 - 687866 | 39913.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
