Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas synxantha |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizospheres |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare, Brassicaceae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas synxantha strain A342 PF_A342_contig_724, whole genome
Gene Summary
Adenine Count
1223985 bp
Thymine Count
1232160 bp
Guanine Count
1827966 bp
Cytosine Count
1829686 bp
Genome Length
6117397 bp
Protein-coding Genes
5237 genes
Non-Coding Genes
170 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellum-specific atp synthase flii | BFW89_02880 | Not Available | Positive | 673172 - 674530 | 48927.1 |
| type iii secretion protein | BFW89_02885 | Not Available | Positive | 674517 - 674945 | 16266.2 |
| flagellar hook-length control protein flik | BFW89_02890 | Not Available | Positive | 674942 - 675400 | 16503.7 |
| type iii secretion protein | BFW89_02895 | Not Available | Positive | 675397 - 676410 | 36258.8 |
| escr/yscr/hrcr family type iii secretion system export apparatus protein | BFW89_02900 | Not Available | Positive | 676407 - 677060 | 23841.4 |
| escs/yscs/hrcs family type iii secretion system export apparatus protein | BFW89_02905 | Not Available | Positive | 677068 - 677331 | 9366.17 |
| esct/ysct/hrct family type iii secretion system export apparatus protein | BFW89_02910 | Not Available | Positive | 677342 - 678130 | 28294.2 |
| escu/yscu/hrcu family type iii secretion system export apparatus switch protein | BFW89_02915 | Not Available | Positive | 678127 - 679224 | 40998.0 |
| transcriptional regulator | BFW89_02920 | Not Available | Negative | 679225 - 679590 | 13333.2 |
| type iii secretion protein | BFW89_02925 | Not Available | Negative | 679587 - 679790 | 7372.98 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
