Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas synxantha |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizospheres |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare, Brassicaceae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas synxantha strain A342 PF_A342_contig_724, whole genome
Gene Summary
Adenine Count
1223985 bp
Thymine Count
1232160 bp
Guanine Count
1827966 bp
Cytosine Count
1829686 bp
Genome Length
6117397 bp
Protein-coding Genes
5237 genes
Non-Coding Genes
170 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BFW89_02825 | Not Available | Negative | 662087 - 662323 | 8887.67 |
| arac family transcriptional regulator | BFW89_02830 | Not Available | Negative | 662779 - 663588 | 30293.1 |
| d-alanine--d-alanine ligase a | BFW89_02835 | Not Available | Positive | 663751 - 664845 | 39073.9 |
| gamma-glutamyltransferase | BFW89_02845 | Not Available | Negative | 665175 - 667004 | 63959.6 |
| isomerase | BFW89_02850 | Not Available | Negative | 667041 - 667820 | 28472.0 |
| Trna-met | Not Available | Not Available | Positive | 667948 - 668024 | Not Available |
| rna polymerase subunit sigma | BFW89_02860 | Not Available | Negative | 668263 - 668814 | 21472.5 |
| sepl/tyea/hrpj family type iii secretion system gatekeeper | BFW89_02865 | Not Available | Positive | 669078 - 670142 | 38395.6 |
| escv/yscv/hrcv family type iii secretion system export apparatus protein | BFW89_02870 | Not Available | Positive | 670139 - 672232 | 76151.7 |
| type iii secretion protein | BFW89_02875 | Not Available | Positive | 672270 - 673175 | 32762.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
