Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas synxantha |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizospheres |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare, Brassicaceae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas synxantha strain A342 PF_A342_contig_724, whole genome
Gene Summary
Adenine Count
1223985 bp
Thymine Count
1232160 bp
Guanine Count
1827966 bp
Cytosine Count
1829686 bp
Genome Length
6117397 bp
Protein-coding Genes
5237 genes
Non-Coding Genes
170 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii secretion system protein f | BFW89_02515 | Not Available | Negative | 592594 - 593481 | 32653.0 |
| type ii secretion system protein f | BFW89_02520 | Not Available | Negative | 593483 - 594364 | 33175.4 |
| atpase | BFW89_02525 | Not Available | Negative | 594373 - 595644 | 47048.2 |
| pilus assembly protein | BFW89_02530 | Not Available | Negative | 595641 - 596834 | 42901.0 |
| secretin | BFW89_02535 | Not Available | Negative | 596831 - 598036 | 42823.8 |
| flp pilus assembly protein cpab | BFW89_02540 | Not Available | Negative | 598056 - 599000 | 32811.6 |
| pilus assembly protein | BFW89_02545 | Not Available | Positive | 599336 - 599533 | 7020.96 |
| histidine kinase | BFW89_02550 | Not Available | Positive | 599587 - 599988 | 15016.2 |
| hypothetical protein | BFW89_02555 | Not Available | Negative | 600487 - 602169 | 62250.7 |
| hypothetical protein | BFW89_02560 | Not Available | Negative | 602356 - 603648 | 38690.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
