Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas synxantha |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizospheres |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare, Brassicaceae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas synxantha strain A342 PF_A342_contig_724, whole genome
Gene Summary
Adenine Count
1223985 bp
Thymine Count
1232160 bp
Guanine Count
1827966 bp
Cytosine Count
1829686 bp
Genome Length
6117397 bp
Protein-coding Genes
5237 genes
Non-Coding Genes
170 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alginate o-acetyltransferase | BFW89_04250 | Not Available | Negative | 949671 - 950327 | 22829.2 |
| alginate o-acetyltransferase | BFW89_04255 | Not Available | Negative | 950344 - 951516 | 43482.6 |
| membrane-bound o-acyltransferase family protein | BFW89_04260 | Not Available | Negative | 951528 - 953060 | 57895.7 |
| poly(beta-d-mannuronate) lyase | BFW89_04265 | Not Available | Negative | 953289 - 954410 | 42316.4 |
| alginate o-acetyltransferase | BFW89_04270 | Not Available | Negative | 954407 - 955855 | 53630.4 |
| poly(beta-d-mannuronate) c5 epimerase | BFW89_04275 | Not Available | Negative | 955867 - 957435 | 57661.2 |
| transcriptional regulator | BFW89_04280 | Not Available | Negative | 957435 - 958922 | 55206.9 |
| alginate biosynthesis protein | BFW89_04285 | Not Available | Negative | 958919 - 960340 | 51451.6 |
| hemolysin d | BFW89_04290 | Not Available | Negative | 960451 - 961617 | 41926.1 |
| glycosyl transferase | BFW89_04300 | Not Available | Negative | 961655 - 963145 | 56247.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
