Streptomyces lydicus

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Kitasatosporales

Family

Streptomycetaceae

Genus

Streptomyces

Description

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderKitasatosporales
FamilyStreptomycetaceae
GenusStreptomyces
SpeciesStreptomyces lydicus
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Streptomyces lydicus
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatroot; soil
Biotic relationshipNot Available
Host(s)Lathyrus oleraceus, root
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Streptomyces lydicus strain 103 chromosome, complete genome.

Gene Summary

Adenine Count

1140383 bp

Thymine Count

1138068 bp

Guanine Count

2958945 bp

Cytosine Count

2963961 bp

Genome Length

8201357 bp

Protein-coding Genes

7195 genes

Non-Coding Genes

91 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
atp-grasp domain-containing proteinSL103_RS03095Not AvailablePositive694146 - 69540845438.4
hydrolaseSL103_RS03100Not AvailablePositive695405 - 69670047260.7
mfs transporterSL103_RS03105Not AvailablePositive696697 - 69794143684.6
nad-dependent epimerase/dehydratase family proteinSL103_RS03110Not AvailablePositive697934 - 69890234698.6
putative quinol monooxygenaseSL103_RS03115Not AvailablePositive698902 - 69919811197.4
type i polyketide synthaseSL103_RS03120Q03132Positive699298 - 708480316278.0
hybrid non-ribosomal peptide synthetase/type i polyketide synthaseSL103_RS03125O68006Positive708506 - 715222237211.0
acyl-coa dehydrogenase family proteinSL103_RS03130Not AvailablePositive715287 - 71641739398.9
hypothetical proteinSL103_RS03135Not AvailableNegative716451 - 71676510227.6
small hydrophobic membrane proteinSL103_RS37610Not AvailableNegative716762 - 7169265883.57

Displaying genes 631 – 640 of 7286 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

482 records
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Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000272(E)-4-coumarateC9H7O3Chemical structure of (E)-4-coumarateNot available
Average163.1501Da
Monoisotopic163.0395191Da
BASm0000277keto-L-sorboseC6H12O6Chemical structure of keto-L-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000399(S)-allantoinC4H6N4O3Chemical structure of (S)-allantoin97-59-6
Average158.1154Da
Monoisotopic158.0439901Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm0000419S-formylmycothiolC18H30N2O13SChemical structure of S-formylmycothiolNot available
Average514.5Da
Monoisotopic514.146860208Da

Displaying 1–10 of 482 metabolites

Health Effects

No health effects information available for this bacterium.