Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga pseudoflava |
| Strain | DSM 1084 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Hydrogenophaga pseudoflava strain DSM 1084 plasmid pDSM1084,
Gene Summary
Adenine Count
8372 bp
Thymine Count
9031 bp
Guanine Count
14491 bp
Cytosine Count
13294 bp
Genome Length
45188 bp
Protein-coding Genes
55 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system mrna interferase toxin, rele/stbe family | HPF_RS23385 | Not Available | Negative | 9071 - 9355 | 10805.0 |
| hypothetical protein | HPF_RS23390 | Not Available | Negative | 9352 - 9630 | 10561.5 |
| recombinase family protein | HPF_RS23395 | Not Available | Positive | 9869 - 10462 | 21320.8 |
| tn3 family transposase | HPF_RS23400 | Not Available | Positive | 10459 - 13488 | 115343.0 |
| jab domain-containing protein | HPF_RS23405 | Not Available | Positive | 13808 - 14317 | 18569.4 |
| hypothetical protein | HPF_RS23410 | Not Available | Negative | 14260 - 14508 | 8798.73 |
| parb/repb/spo0j family partition protein | HPF_RS23415 | Not Available | Positive | 15006 - 16949 | 70248.5 |
| hypothetical protein | HPF_RS23735 | Not Available | Negative | 17081 - 17455 | 13102.5 |
| n-6 dna methylase | HPF_RS23420 | Not Available | Positive | 18109 - 18987 | 32335.9 |
| bsubi/psti family type ii restriction endonuclease | HPF_RS23425 | Not Available | Negative | 18990 - 20078 | 39955.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.