Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Tannerellaceae
Genus
Parabacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Tannerellaceae |
| Genus | Parabacteroides |
| Species | Parabacteroides merdae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gastrointestinal tract; gut microbiomes |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Parabacteroides merdae strain AF33-34 AF33-34.Scaf71, whole genome
Gene Summary
Adenine Count
1260656 bp
Thymine Count
1270019 bp
Guanine Count
1053244 bp
Cytosine Count
1051121 bp
Genome Length
4635236 bp
Protein-coding Genes
3753 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase family 92 protein | DWZ59_04880 | Not Available | Negative | 1071912 - 1074197 | 85926.6 |
| ragb/susd family nutrient uptake outer membrane protein | DWZ59_04885 | Not Available | Negative | 1074339 - 1075823 | 56129.8 |
| tonb-dependent receptor | DWZ59_04890 | Not Available | Negative | 1075838 - 1079038 | 116699.0 |
| glycoside hydrolase family 2 | DWZ59_04895 | Not Available | Negative | 1079316 - 1082084 | 104801.0 |
| ragb/susd family nutrient uptake outer membrane protein | DWZ59_04900 | Not Available | Negative | 1082194 - 1083666 | 55790.1 |
| susc/raga family tonb-linked outer membrane protein | DWZ59_04905 | Not Available | Negative | 1083687 - 1087052 | 122840.0 |
| duf4974 domain-containing protein | DWZ59_04910 | Not Available | Negative | 1087169 - 1088380 | 46110.1 |
| sigma-70 family rna polymerase sigma factor | DWZ59_04915 | Not Available | Negative | 1088461 - 1089045 | 23200.0 |
| hypothetical protein | DWZ59_04920 | Not Available | Negative | 1089097 - 1089345 | 9602.85 |
| duf4974 domain-containing protein | DWZ59_04925 | Not Available | Positive | 1089910 - 1090857 | 36487.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

