Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Tannerellaceae
Genus
Parabacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Tannerellaceae |
| Genus | Parabacteroides |
| Species | Parabacteroides merdae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gastrointestinal tract; gut microbiomes |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Parabacteroides merdae strain AF33-34 AF33-34.Scaf71, whole genome
Gene Summary
Adenine Count
1260656 bp
Thymine Count
1270019 bp
Guanine Count
1053244 bp
Cytosine Count
1051121 bp
Genome Length
4635236 bp
Protein-coding Genes
3753 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nodulation protein nfed | DWZ59_03340 | Not Available | Negative | 724763 - 726145 | 50023.3 |
| rna polymerase sigma factor | DWZ59_03345 | Not Available | Positive | 726407 - 726916 | 19599.7 |
| low specificity l-threonine aldolase | DWZ59_03350 | Not Available | Positive | 727015 - 728037 | 38033.4 |
| endonuclease | DWZ59_03355 | Not Available | Positive | 728133 - 730001 | 70271.8 |
| purine permease | DWZ59_03360 | Not Available | Positive | 730020 - 731390 | 47874.7 |
| xanthine phosphoribosyltransferase | DWZ59_03365 | Not Available | Positive | 731393 - 731959 | 21244.1 |
| histidine phosphatase family protein | DWZ59_03370 | Not Available | Negative | 732023 - 732547 | 19436.8 |
| Trna-met | Not Available | Not Available | Positive | 732616 - 732690 | Not Available |
| hypothetical protein | DWZ59_03380 | Not Available | Negative | 732826 - 733143 | 12280.7 |
| j domain-containing protein | DWZ59_03385 | Not Available | Negative | 733158 - 734051 | 33395.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

