Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Tannerellaceae
Genus
Parabacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Tannerellaceae |
| Genus | Parabacteroides |
| Species | Parabacteroides merdae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gastrointestinal tract; gut microbiomes |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Parabacteroides merdae strain AF33-34 AF33-34.Scaf71, whole genome
Gene Summary
Adenine Count
1260656 bp
Thymine Count
1270019 bp
Guanine Count
1053244 bp
Cytosine Count
1051121 bp
Genome Length
4635236 bp
Protein-coding Genes
3753 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWZ59_03180 | Not Available | Negative | 684548 - 687529 | 105439.0 |
| duf4469 domain-containing protein | DWZ59_03185 | Not Available | Negative | 687685 - 688455 | 27773.1 |
| helix-turn-helix domain-containing protein | DWZ59_03190 | Not Available | Negative | 688646 - 689821 | 44316.6 |
| tonb-dependent receptor | DWZ59_03195 | Not Available | Positive | 690231 - 693029 | 104992.0 |
| ig domain-containing protein | DWZ59_03200 | Not Available | Positive | 693074 - 694714 | 57994.9 |
| toxin-antitoxin system ywqk family antitoxin | DWZ59_03205 | Not Available | Positive | 694719 - 695195 | 18433.6 |
| alkaline phosphatase family protein | DWZ59_03210 | Not Available | Negative | 695272 - 697149 | 70311.2 |
| abc-f family atpase | DWZ59_03215 | Not Available | Negative | 697233 - 698846 | 61236.1 |
| peptidase m28 | DWZ59_03220 | Not Available | Negative | 698980 - 700524 | 57172.7 |
| ferredoxin | DWZ59_03225 | Not Available | Positive | 700738 - 701511 | 28528.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

