Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Tannerellaceae
Genus
Parabacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Tannerellaceae |
| Genus | Parabacteroides |
| Species | Parabacteroides merdae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gastrointestinal tract; gut microbiomes |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Parabacteroides merdae strain AF33-34 AF33-34.Scaf71, whole genome
Gene Summary
Adenine Count
1260656 bp
Thymine Count
1270019 bp
Guanine Count
1053244 bp
Cytosine Count
1051121 bp
Genome Length
4635236 bp
Protein-coding Genes
3753 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carboxynorspermidine decarboxylase | DWZ59_00435 | Not Available | Negative | 94815 - 95954 | 43338.1 |
| blai/meci/copy family transcriptional regulator | DWZ59_00440 | Not Available | Positive | 96243 - 96602 | 14065.0 |
| m56 family peptidase | DWZ59_00445 | Not Available | Positive | 96623 - 97942 | 49837.4 |
| glycoside hydrolase | DWZ59_00450 | Not Available | Negative | 98118 - 100334 | 83372.9 |
| glycoside hydrolase | DWZ59_00455 | Not Available | Negative | 100346 - 102925 | 97165.9 |
| alpha-l-rhamnosidase | DWZ59_00460 | Not Available | Negative | 102943 - 104694 | 65013.1 |
| rhamnulose-1-phosphate aldolase | DWZ59_00465 | Not Available | Negative | 105188 - 105988 | 29368.8 |
| l-rhamnose/proton symporter rhat | DWZ59_00470 | Not Available | Negative | 106157 - 107182 | 36214.9 |
| l-rhamnose isomerase | DWZ59_00475 | Not Available | Negative | 107227 - 108483 | 47706.7 |
| rhamnulokinase | DWZ59_00480 | Not Available | Negative | 108488 - 109966 | 54856.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

