Sphingobium chlorophenolicum str. NBRC 16172

Gram-negativeBacilliNon-motileAerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingobiaceae

Genus

Sphingobium

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingobiaceae
GenusSphingobium
SpeciesSphingobium chlorophenolicum
StrainNBRC 16172

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityNo
Flagellar presenceYes
Number of membranesNot Available
Image of Sphingobium chlorophenolicum str. NBRC 16172
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
Habitatcontaminated sites
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingobium chlorophenolicum strain NBRC 16172 contig000129, whole

Gene Summary

Adenine Count

856483 bp

Thymine Count

856435 bp

Guanine Count

1540788 bp

Cytosine Count

1542416 bp

Genome Length

4796122 bp

Protein-coding Genes

4481 genes

Non-Coding Genes

60 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
trau family proteinBV95_00559Not AvailablePositive570780 - 57179336583.7
type-f conjugative transfer system pilin assembly protein trbcBV95_00560Not AvailablePositive571803 - 57254626039.2
mating pair stabilization tran family proteinBV95_00561Not AvailablePositive572550 - 57469475525.4
hypothetical proteinBV95_00562Not AvailablePositive574691 - 57509815323.7
hypothetical proteinBV95_00563Not AvailablePositive575100 - 57600833399.4
conjugative relaxosome accessory transposon family proteinBV95_00564Not AvailablePositive576008 - 57745051051.9
peptidase m23 family proteinBV95_00565Not AvailablePositive577474 - 580728116940.0
hypothetical proteinBV95_00566Not AvailableNegative580725 - 5809739290.97
hypothetical proteinBV95_00567Not AvailablePositive581088 - 58144713611.0
putative acr, family proteinBV95_00568Not AvailablePositive581516 - 58207020565.5

Displaying genes 561 – 570 of 4541 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

5 records
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Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0003389NADP(+)C21H25N7O17P3Chemical structure of NADP(+)Not available
Average740.386Da
Monoisotopic740.053624107Da
BASm00086222-(glutathione-S-yl)-hydroquinoneC16H20N3O8SChemical structure of 2-(glutathione-S-yl)-hydroquinoneNot available
Average414.41Da
Monoisotopic414.0976594Da
BASm0017271NADC21H28N7O14P2Chemical structure of NAD53-84-9
Average664.433Da
Monoisotopic664.116946663Da
BASm00177315,10-MethenyltetrahydrofolateC20H22N7O6Chemical structure of 5,10-Methenyltetrahydrofolate7444-29-3
Average456.432Da
Monoisotopic456.163156471Da

Displaying 1–5 of 5 metabolites

Health Effects

No health effects information available for this bacterium.