Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium chlorophenolicum |
| Strain | NBRC 16172 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | contaminated sites |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
856483 bp
Thymine Count
856435 bp
Guanine Count
1540788 bp
Cytosine Count
1542416 bp
Genome Length
4796122 bp
Protein-coding Genes
4481 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| isoprenyl transferase | BV95_00449 | Not Available | Positive | 466072 - 466812 | 26936.3 |
| phosphatidate cytidylyltransferase precursor | BV95_00450 | Not Available | Positive | 466818 - 467594 | 26718.6 |
| 1-deoxy-d-xylulose 5-phosphate reductoisomerase | BV95_00451 | Not Available | Positive | 467594 - 468751 | 40317.5 |
| peptidase | BV95_00452 | Not Available | Positive | 468748 - 469881 | 40571.8 |
| outer membrane protein assembly factor bama precursor | BV95_00453 | Not Available | Positive | 469974 - 472628 | 98471.8 |
| membrane protein | BV95_00454 | Not Available | Positive | 472628 - 473284 | 22574.0 |
| 3-hydroxyacyl-(acyl-carrier-protein) dehydratase fabz | BV95_00455 | Not Available | Positive | 473292 - 473774 | 17064.1 |
| 50s ribosomal protein l31 | BV95_00456 | Not Available | Positive | 473896 - 474120 | 8293.76 |
| 3-dehydroquinate synthase | BV95_00457 | Not Available | Negative | 474396 - 475505 | 39030.9 |
| shikimate kinase | BV95_00458 | Not Available | Negative | 475496 - 476044 | 19937.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.