Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | VS-05 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio scophthalmi strain VS-05 chromosome 2, complete sequence.
Gene Summary
Adenine Count
408233 bp
Thymine Count
411806 bp
Guanine Count
324856 bp
Cytosine Count
322319 bp
Genome Length
1467214 bp
Protein-coding Genes
1282 genes
Non-Coding Genes
10 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding protein | VSVS05_RS14590 | Not Available | Positive | 707 - 3400 | 101173.0 |
| dcmp deaminase family protein | VSVS05_RS14595 | Not Available | Negative | 3381 - 3836 | 16973.2 |
| cytosine deaminase | VSVS05_RS14600 | Not Available | Negative | 4505 - 5782 | 47734.1 |
| cytosine permease | VSVS05_RS14605 | Not Available | Negative | 5792 - 7030 | 42761.1 |
| azurin | VSVS05_RS14610 | Not Available | Positive | 7695 - 8147 | 15959.0 |
| dihydroorotase | VSVS05_RS14615 | Not Available | Negative | 8281 - 9309 | 37464.7 |
| hybrid-cluster nad(p)-dependent oxidoreductase | VSVS05_RS14620 | Not Available | Positive | 9605 - 11416 | 67321.4 |
| dmt family transporter | VSVS05_RS14625 | Not Available | Negative | 11487 - 12392 | 32571.4 |
| helix-turn-helix domain-containing protein | VSVS05_RS14630 | Not Available | Positive | 12491 - 13282 | 30135.9 |
| methyl-accepting chemotaxis protein | VSVS05_RS14635 | Not Available | Negative | 13426 - 15171 | 62680.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
